When Romana eventually returned to her own universe, she brought K9 Mark II with her (presumably having repaired it) and eventually became Lady President of Gallifrey. K9 Mark II is first seen on Gallifrey in the Virgin New Adventures novel Lungbarrow by Marc Platt, alongside K9 Mark I, which had remained with Leela. Both K9 Mark I and Mark II appear, voiced by Leeson, in the Big Finish Productions audio adventure Zagreus and the Gallifrey audio series. Leela's K9 (Mark I) was destroyed at the conclusion of the second Gallifrey series and only Mark II appears in the third series.

When being imprisoned by the Sporraxx they tried to access K9's memory core. Memories that K9 had assumed to be erased were slowly coming back and the Sporraxx got to know more and more about K9's past. They reprogrammed K9 to protect a small spherical marauder bomb, that would destroy Earth. However K9 was able to break free of their control, because deep in his memories a sense of right and wrong prevailed. He took the bomb back into the Sporraxx space ship where it exploded. (COMIC: Short Circuit)

The initial idea for realising K9 was to use a small actor inside a robotic Dobermann costume, but that was rejected in favour of a radio-controlled prop, designed by Tony Harding and made by the BBC Visual Effects Department. The Radio Control Model Centre in Harlington Middx owned by Derek Wales was commissioned to build the electronics into the first original basic shell and consequently the centre operated the dog on set for the BBC.[citation needed] The robot suffered from numerous technical problems during its time in the series, often malfunctioning because the radio controls interfered with the cameras and vice versa. On location, K9 also proved unable to traverse uneven terrain, and shots had to be conceived with this in mind. Workarounds included using a concealed piece of twine to pull the character along (this string can be clearly seen in a shot of K9 on Brighton Beach), or laying wooden planks on which it could roll.
Although the first incarnation of K9 does not appear again in televised Doctor Who media, he is the star of the 2009 K9 television series, in which he undergoes a sort of "regeneration" process from which a new, more sophisticated and futuristic K9 emerges;[1] in the first series of K9, the character is transported to London c. 2050 by Professor Gryffen (Robert Moloney). Though on regeneration the character loses his memory of his adventures with the Doctor, he assists Gryffen and several teenage companions against a dystopian regime of "The Department". The upgraded K9 has new specifications, sporting a sophisticated head-up display, the ability to fly, and more powerful laser weapons.