K9 Mark 2 was the result of the activation of the Mark I's onboard regeneration unit. He had only very limited memories of his past as the Mark I. He had many adventures with Alistair Gryffen, Jorjie Turner, Darius Pike and his new master Starkey. (TV: Regeneration, The Bounty Hunter) Orthrus was an attempt by Drake and the Department to replicate K9, but it was of vastly inferior design. (TV: Jaws of Orthrus)
Damaged by the time winds, K9 Mark II could not cross back into N-Space with the Doctor. He decided to stay behind at the Gateway with Romana II to help her free the remaining Tharils from slavery. (TV: Warriors' Gate) Eventually, Romana II and the presumably repaired K9 returned to their own universe and K9 Mark II came to live on Gallifrey. (PROSE: Lungbarrow, WC: Shada, AUDIO: Zagreus)
When the Tenth Doctor created K9 Mark IV to replace K9 Mark III, he added a shiny metallic blue paint job and other improvements, including an omniflexible hyperlink facility. (TV: School Reunion) Later, though, K9 reverted to his old dark green colour. (TV: Invasion of the Bane) In battling Mr Smith (and following the battle) K9 displayed a teleport facility and a laser weapon similar to the previous K9s'. (TV: The Lost Boy)
The practical challenges of working with the K9 prop have accompanied the robotic pooch in his return to Doctor Who. Producer Russell T Davies told SFX magazine, "Yes, just as we expected, multiple takes [were required] when he bumped into a door or veered off to the left. Lis Sladen did warn us, and she was right!" 2009 saw two different incarnations of K9 appear regularly in two Doctor Who spin-offs: Mark IV in the third series of BBC production The Sarah Jane Adventures, and a re-vamped Mark I in the Park Entertainment production K9.
After debuting in the final scene of "School Reunion" (2006), K9 Mark IV returned in spin-off series The Sarah Jane Adventures' premiere episode "Invasion of the Bane", where due to licensing issues with creator Bob Baker it is explained that K9 is sealing a black hole and can only communicate briefly and infrequently with Sarah Jane. The character makes an heroic appearance in the first series finale The Lost Boy, to do battle with rogue alien supercomputer Mr Smith (Alexander Armstrong), demonstrating new CGI teleportation and hovering features. K9 Mark IV's interfaces include at least one USB port. Subsequently, the character appears briefly in the Doctor Who series four series finale "Journey's End" (2008), wherein K9 and Mr Smith assist the Doctor in returning Earth to its proper position. K9 next appears in the comedic Red Nose Day 2009 Sarah Jane mini-episode "From Raxacoricofallapatorius with Love". A deal with the creators of K9 having been struck, K9 Mark IV became a regular character in The Sarah Jane Adventures in third series story, The Mad Woman in the Attic (2009), until the series four premiere The Nightmare Man (2010), where he accompanies departing series regular, Sarah Jane's adoptive son Luke Smith (Tommy Knight), to university. He appears again in series four finale, Goodbye, Sarah Jane Smith. Though he doesn't appear in the serial, it is mentioned in The Man Who Never Was (2011) that Luke invented a special dog whistle to summon him with.